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Montpellier GenomiX

Publications 2016


  • Nasri A, Valverde AJ, Roche DB, Desrumaux C, Clair P, Beyrem H, Chaloin L, Ghysen A, Perrier V (2016) Neurotoxicity of a Biopesticide Analog on Zebrafish Larvae at Nanomolar Concentrations. Int J Mol Sci. 17:E2137
  • Leitwein M, Gagnaire PA, Desmarais E, Guendouz S, Rohmer M, Berrebi P, Guinand B (2016) Genome-wide nucleotide diversity of hatchery-reared Atlantic and Mediterranean strains of brown trout Salmo trutta compared to wild Mediterranean populations. J Fish Biol. 89:2717-2734
  • Doublet V, Paxton RJ, McDonnell CM, Dubois E, Nidelet S, Moritz RF, Alaux C, Le Conte Y (2016) Brain transcriptomes of honey bees (Apis mellifera) experimentally infected by two pathogens : Black queen cell virus and Nosema ceranae. Genom Data. 10:79-82
  • Eckenfelder A, Ségéral E, Pinzón N, Ulveling D, Amadori C, Charpentier M, Nidelet S, Concordet JP, Zagury JF, Paillart JC, Berlioz-Torrent C, Seitz H, Emiliani S, Gallois-Montbrun S. Argonaute proteins regulate HIV-1 multiply spliced RNA and viral production in a Dicer independent manner. Nucleic Acids Res. In press
  • Aburjaile FF, Rohmer M, Parrinello H, Maillard MB, Beaucher E, Henry G, Nicolas A, Madec MN, Thierry A, Parayre S, Deutsch SM, Cocaign-Bousquet M, Miyoshi A, Azevedo V, Le Loir Y, Falentin H (2016) Adaptation of Propionibacterium freudenreichii to long-term survival under gradual nutritional shortage. BMC Genomics. 17:1007
  • Bournaud C, Moulin L, Cnockaert M, de Faria SM, Prin Y, Severac D, Vandamme P (2016) Paraburkholderia piptadeniae sp. nov. and Paraburkholderia ribeironis sp. nov., two root-nodulating symbiotic species of Piptadenia gonoacantha in Brazil. Int J Syst Evol Microbiol. In press
  • Picard MA, Boissier J, Roquis D, Grunau C, Allienne JF, Duval D, Toulza E, Arancibia N, Caffrey CR, Long T, Nidelet S, Rohmer M, Cosseau C (2016) Sex-Biased Transcriptome of Schistosoma mansoni : Host-Parasite Interaction, Genetic Determinants and Epigenetic Regulators Are Associated with Sexual Differentiation. PLoS Negl Trop Dis. 10:e0004930
  • Loubiere V, Delest A, Thomas A, Bonev B, Schuettengruber B, Sati S, Martinez AM, Cavalli G (2016) Coordinate redeployment of PRC1 proteins suppresses tumor formation during Drosophila development. Nat Genet. 48:1436-42
  • Caubit X, Gubellini P, Andrieux J, Roubertoux PL, Metwaly M, Jacq B, Fatmi A, Had-Aissouni L, Kwan KY, Salin P, Carlier M, Liedén A, Rudd E, Shinawi M, Vincent-Delorme C, Cuisset JM, Lemaitre MP, Fatimetou A, Duban B, Lemaitre JF, Woolf AS, Bockenhauer D, Severac D, Dubois E, Zhu Y, Sestan N, Garratt AN, Kerkerian-Le Goff N, Fasano L (2016) TSHZ3 deletion causes an autism syndrome and defects in cortical projection neurons Nat Genet. 48:1359-69
  • Pontvianne F, Carpentier MC, Durut N, Pavlištová V, Jaške K, Schořová Š, Parrinello H, Rohmer M, Pikaard CS, Fojtová M, Fajkus J, Sáez-Vásquez J (2016) Identification of Nucleolus-Associated Chromatin Domains Reveals a Role for the Nucleolus in 3D Organization of the A. thaliana Genome. Cell Rep. 16:1574-87
  • Gautier M, Moazami-Goudarzi K, Leveziel H, Parinello H, Grohs C, Rialle S, Kowalczyk R, Flori L (2016) Deciphering the wisent demographic and adaptive histories from individual whole-genome sequences. Mol Biol Evol. 33:2801-2814
  • Lashermes P, Hueber Y, Combes MC, Severac D, Dereeper A (2016) Inter-genomic DNA Exchanges and Homoeologous Gene Silencing Shaped the Nascent Allopolyploid Coffee Genome (Coffea arabica L.). G3. 6:2937-48
  • Chaintreuil C, Rivallan R, Bertioli DJ, Klopp C, Gouzy J, Courtois B, Leleux P, Martin G, Rami JF, Gully D, Parrinello H, Séverac D, Patrel D, Fardoux J, Ribière W, Boursot M, Cartieaux F, Czernic P, Ratet P, Mournet P, Giraud E, Arrighi JF (2016) A gene-based map of the Nod factor-independent Aeschynomene evenia sheds new light on the evolution of nodulation and legume genomes. DNA Res. 23:365-76
  • Guerin C, Joët T, Serret J, Lashermes P, Vaissayre V, Agbessi MD, Beulé T, Severac D, Amblard P, Tregear J, Durand-Gasselin T, Morcillo F, Dussert S (2016) Gene coexpression network analysis of oil biosynthesis in an interspecific backcross of oil palm. Plant J. 87:423-41
  • Bataillon T, Galtier N, Bernard A, Cryer N, Faivre N, Santoni S, Severac D, Mikkelsen TN, Larsen KS, Beier C, Sørensen JG, Holmstrup M, Ehlers BK (2016) A replicated climate change field experiment reveals rapid evolutionary response in an ecologically important soil invertebrate. Glob Chang Biol. 22:2370-9
  • Narbonne-Reveau K, Lanet E, Dillard C, Foppolo S, Chen CH, Parrinello H, Rialle S, Sokol NS, Maurange C (2016) Neural stem cell-encoded temporal patterning delineates an early window of malignant susceptibility in Drosophila Elife. 5 : e13463
  • Roquis D, Rognon A, Chapparo C, Boissier J, Arancibia N, Cosseau C, Parrinello H, Grunau C (2016) Frequency and mitotic heritability of epimutations in Schistosoma mansoni. Mol Ecol. 25:1741-58
  • Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J (2016) Gene evolution and gene expression after whole genome duplication in fish : the PhyloFish database. BMC Genomics. 17:368
  • Zorrilla-Fontanesi Y, Rouard M, Cenci A, Kissel E, Do H, Dubois E, Nidelet S, Roux N, Swennen R, Carpentier SC (2016) Differential root transcriptomics in a polyploid non-model crop : the importance of respiration during osmotic stress. Sci Rep. 6:22583

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